Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015940978.1_cds_XP_016485033.1_75998
CDS Infomation

[gene=LOC107805489] [db_xref=GeneID:107805489] [protein=vacuolar amino acid transporter 1-like isoform X2] [protein_id=XP_016485033.1] [location=join(73179..73384,74798..75057,75514..75728,75824..75847,75952..76132,76231..76450,76564..76699,76884..77049,77148..77191,77282..77291,77490..77521)] [gbkey=CDS]
Sequence

ATGGGAATGAGATTAGATGAAGAATTTGGAGCAGATAGGGTGTTACAAATCGAAACAGAC
GATGAAGAGAATGAAGCAGATGATTACAAGATTGAAGAAGATGATGATGATAGTGGATCT
GATTTTACCCTTCACTCTCCAGTACATGAGCCATCTCATAGCCAAATTGGACCTCATGAT
TCCCCTACTTGGCCTCAAAGTTACAGGCAGTCAATGGACATGTTCACAGGTGTGACCCCT
CCTTCACTCAGCTTTTTAAGGGGAAGCTCCTTCTTGAGGTCTCAGACTACTCCAACGCCT
CAACCTTCGATTTGCAAACCTCTAATTTCCTCTCTGCGCTCAGACAAGGAAGAAGTTCCA
ACCTTAACACATCCAACAAGGTTATCTGTTGTCTCTTCAGCAAGATATTCAGCACTTGAA
TTGCCACCATCACAGCAGTGTTCATATACTCAATCAGTTCTTAATGCGATAAATGCTCTC
TGTGGAATAGGGATACTTTCGACTCCCTATGCACTCAAAGAAGGAGGATGGTGTAGCCTT
TTTCTGCTGCTGCTTTTTGGAATCATTACTTTCTACACTGGAATTTTGTTGAAAAAATGT
TTAGACAGTTCTCCTGGTATTGAAACCTATCCTGATATCGGACAAGCTGCTTTTGGAATG
CTAGGTCGAATATTTATAGCTGTAGCCTTATACGCGGAACTATATTCCTCTTGCATCGAG
TATTTGATTATGATGAGTGACAATCTTGGTGCCATATTCCCAAGTGCTCGCATGGTCTTT
GCTGGAATTCATCTGGATTCTTATCAAATGTGTGCTATCATTTCTACCCTTGTCATACTT
CCAACAGTTTGGCTAAGAAACCTCAGTTTGCTGTCATACATTTCAGCTGGTGGAGTGATT
GCACTGATTGTCGTGGTGCTTTGCTTGTTATGGGTTGGCGCGATCAATGAAGTTGGATTT
CACTCGGGTGGAACAGCATTAAACATTGCAAAATTGCCCGTCACAATTGGTCTATATAGT
TTTTGCTATGGCAGCCATTCAGTTTTCCCAAATATCTACTCATCAATGAAAGAACCTTCA
AGATTTCCTTCTGTTCTACTTATAAGCTTTTCCATTGCCTTCTTTTCGTACCTCGGAGTA
GCAGTTTGTGGCTTCCTAATGTTTGGTGAAAACACCAGTCCGCAGTTCACATTGAATTTG
CCAGCAAAACTTATTACTTCAAAAGTTGCAGCTTGGACAGTGGTTTTAACCCCTGTCACA
AAATATGCCATAACAATTACACCAGTCGCGTTTGGCATTGAAGAATTCTTACCTTCACGT
CAGCTTAGAACTTATGGTGTATCGATCCTCATCAGAACAATTCTGGTGTTTTCAACTTTG
GTCATTTCACTAACAGTTCCATATTTTGGTTCTGTAATGTCATTGATTGGATCTTCACTA
GTAATGCTTGTGGAGGTTTCAGTCTCTGATCCTTCCTTGTGCATGCTACATTAA

Peptide Sequence

PEP ID

XP_016485033.1
PEP Infomation

PREDICTED: vacuolar amino acid transporter 1-like isoform X2 [Nicotiana tabacum]
Sequence

MGMRLDEEFGADRVLQIETDDEENEADDYKIEEDDDDSGSDFTLHSPVHEPSHSQIGPHD
SPTWPQSYRQSMDMFTGVTPPSLSFLRGSSFLRSQTTPTPQPSICKPLISSLRSDKEEVP
TLTHPTRLSVVSSARYSALELPPSQQCSYTQSVLNAINALCGIGILSTPYALKEGGWCSL
FLLLLFGIITFYTGILLKKCLDSSPGIETYPDIGQAAFGMLGRIFIAVALYAELYSSCIE
YLIMMSDNLGAIFPSARMVFAGIHLDSYQMCAIISTLVILPTVWLRNLSLLSYISAGGVI
ALIVVVLCLLWVGAINEVGFHSGGTALNIAKLPVTIGLYSFCYGSHSVFPNIYSSMKEPS
RFPSVLLISFSIAFFSYLGVAVCGFLMFGENTSPQFTLNLPAKLITSKVAAWTVVLTPVT
KYAITITPVAFGIEEFLPSRQLRTYGVSILIRTILVFSTLVISLTVPYFGSVMSLIGSSL
VMLVEVSVSDPSLCMLH

Transcript Sequence

Gene sequence data has not been registered.